Keck Science 3 Colleges * 3 Disciplines * 1 Department

Selected Publications in Biology

Current Number of publications listed in Biology: 568


1. de Jong TR, Harris BN , Perea-Rodriguez JP, Saltzman W. in press. Physiological and neuroendocrine responses to chronic variable stress in male California mice (Peromyscus californicus):influence of social environment and paternal state. Psychoneuroendocrinology : . Abstract
 
2. Thines B, Youn, Duarte M, and Harmon FG. 2014. The time of day effects of warm temperature on flowering time involve PIF4 and PIF5. Journal of Experimental Botany : .
 
3. Yoder, AD, LM Chan, M dos Reis, PA Larsen, CR Campbell, R Rasolarison, M. Barrett, C. Roos, P Kappeler, JP Bielawski, and Z Yang. 2014. Molecular evolutionary characterization of a V1R subfamily unique to strepsirrhine primates. Genome Biology and Evolution : . Article
 
4. *Shi, JJ, LM Chan, **Z Rakotomalala, **AM Heilman, SM Goodman, and AD Yoder. 2013. Latitude drives diversification in Madagascar's endemic dry forest rodent Eliurus myoxinus (subfamily Nesomyinae). Biological Journal of the Linnean Society 110: 500-517.
 
5. Harris BN , Saltzman W. 2013. Effect of reproductive status on HPA activity and reactivity in male California mice (Peromyscus californicus). Physiology and Behavior 112-113: 70-76. Abstract Article
 
6. Harris BN, Saltzman W. 2013. Effects of aging on hypothalamic-pituitary-adrenal (HPA) axis activity and reactivity in virgin male and female California mice (Peromyscus californicus). General and Comparative Endocrinology 186: 41-49. Abstract Article
 
7. Adey, W., Halfar, J., and Williams, B. 2013. Biological, physiological and ecological factors controlling clathrostrome formation and producing a precision Arctic/Subarctic marine climate archive: the calcified coralline genus Clathromorphum Foslie. Smithsonian Institution Contributions to the Marine Sciences : .
 
8. Bugga L, McDaniel IE, Engie L, Armstrong JA. 2013. The Drosophila melanogaster CHD1 chromatin remodeling factor modulates global chromosome structure and counteracts HP1a and H3K9me2. PLoS One 8: e59496. Abstract Article
 
9. Chan, LM, JW Archie, AD Yoder, and LA Fitzgerald. 2013. Review of the systematic status of Sceloporus arenicolus Degenhardt and Jones 1972 with an estimate of divergence time. Zootaxa 3664: 312-320.
 
10. J G Milton, A. Fuerte, C. Belair, J. Lippai, A. Kamimura and T. Ohira. 2013. Delayed pursuit-escape as a model for virtual stick balancing . Nonlinear Theory and Its Applications, IEICE 4: 129-137. Abstract Article
 
11. P. J. Marin, A. J. Herrero, J. Milton, T. J. Hazell and D. Garcia-Lopez. 2013. Whole-body vibration applied during upper body exercise improves performance. Journal of Strength and Conditioning Research in press: . Abstract
 
12. T. Insperger, J. Milton and G. Stepan. 2013. Acceleration feedback improves balancing against reflex delay. Interface Royal Society 10: 20120763. Abstract Article
 
13. Thines B, Mandaokar A, and Browse J. 2013. Characterizing jasmonate regulation of male fertility in Arabidopsis. Methods Mol Biol. 1011: 13-23.
 
14. Harris BN, Saltzman W, de Jong TR, Milnes MR. 2012. HPA function in the California Mouse (Peromyscus californicus): Changes in baseline activity, reactivity, and fecal excretion of corticosterone across the diurnal cycle. General and Comparative Endocrinology 179: 436-450. Abstract Article
 
15. Chan, LM, *D Choi, AP Raselimanana, HA Rakotondravony, and AD Yoder. 2012. Defining spatial and temporal patterns of phylogeographic structure in Madagascar's iguanid lizards (genus Oplurus). Molecular Ecology 21: 3839-3851.
 
16. de Jong TR, Korosi A, Harris BN , Perea-Rodriguez JP, Saltzman W. 2012. Individual variation in paternal responses of virgin California mice (Peromyscus californicus): behavioral and physiological correlates. Physiological and Biochemical Zoology 85: 740-751. Abstract Article
 
17. Dlugosz EM, Harris BN, Saltzman W, Chappell MA. 2012. Glucocorticoids, aerobic physiology, and locomotor behavior in California Mice. Physiological and Biochemical Zoology 85: 671-683. Abstract Article
 
18. H Gerstein, K O’Riordan, S Osting, M Schwarz & C Burger. 2012. Rescue of synaptic plasticity and spatial learning deficits in the hippocampus of Homer1 knockout mice by recombinant Adeno-associated viral gene delivery of Homer1c. Neurobiology of Learning & Memory 97: 17-29. Abstract Article
 
19. H Gerstein, R Hullinger, MJ Lindstrom & C Burger. 2012. A Behavioral Paradigm to Evaluate Hippocampal Performance in Aged Rodents for Pharmacological and Genetic Target Validation. PLoS One (in press) : .
 
20. Hönisch, B., Ridgwell, A., Schmidt, D.N., Thomas, E., Gibbs, S.J., Sluijs, A., Zeebe, R., Kump, L., Martindale, R., Greene, S., Kiessling, W., Ries, J., Zachos, J., Royer, D., Barker, S., Marchitto Jr, T.M., Moyer, R., Pelejero, C, Ziveri, P., Foster, G.L., and Williams, B. 2012. The geological record of ocean acidification. Science 335: 1058-1063. Article
 
21. J Milton. 2012. Neuronal avalanches, epileptic quakes and other transient forms of neurodynamics. European Journal of Neuroscience 36: 2156-2163. Abstract Article
 
22. J. G. Milton. 2012. Intermittent motor control: The "drift-and-act" hypothesis. Progress in Motor Control: Neural, computational and dynamic approaches : 169-193. Abstract Article
 
23. J. L. Cabrera and J. G. Milton. 2012. Stick balancing, falls and Dragon Kings. European Physics Journal Special Topics 205: 231-241. Abstract Article
 
24. Johnson, LA, LM Chan, K Burr, and D Hendrickson. 2012. Navarretia furnissii (Polemoniaceae), a new diploid species from the intermountain western United States distinguished from tetraploid Navarretia saximontana. Phytotaxa 42: 51-61.
 
25. Johnson, LA, LM Chan, R Pozner, and LD Glazier. 2012. Allotetraploids in Patagonia with affinities to western North American diploids: did dispersal or genome doubling occur first?. Botanical Review 78: 288-306.
 
26. Marta Radman-Livaja, Tiffani K. Quan, Lourdes Valenzuela, Jennifer A. Armstrong, Tibor van Welsem, TaeSoo Kim, Laura J. Lee, Stephen Buratowski, Fred van Leeuwen, Oliver J. Rando, Grant A. Hartzog. 2012. A Key Role for Chd1 in Histone H3 Dynamics at the 3′ Ends of Long Genes in Yeast. PLoS Genetics : 10.1371/journal.pgen.1002811. Abstract Article
 
27. Weisrock, DW, SD Smith, LM Chan, K Biebouw, PM Kappeler, and AD Yoder. 2012. Concatenation and concordance in the reconstruction of Mouse Lemur phylogeny: an empirical demonstration of the effect of allele sampling in phylogenetics. Molecular Biology and Evolution 29: 1615-1630.
 
28. Williams, S.M.*, A. Nast* and M.J. Coleman. 2012. Characterization of synaptically connected nuclei in a potential motor feedback pathway in the zebra finch song system. PLoS ONE 7(2): e32178. Abstract
 
29. Zhaohua Tang, Maria Luca, Laura Taggart-Murphy, Jessica Portillio, Cathey Chang, Ayse Guven, Ren-Jang Lin, Johanne Murray, and Antony Carr. 2012. Interacting Factors and Cellular Localization of SR Protein-specific Kinase Dsk1.. Experimental Cell Research 318 (16): 2071-2084. Abstract Article
 
30. Harris BN, Perea-Rodriguez JP, Saltzman W. 2011. Acute effects of corticosterone injection on paternal behavior in California mouse (Peromyscus californicus) fathers. Hormones and Behavior 60: 666-675. Abstract Article
 
31. A. Quan, I. Osorio, T. Ohira and J. Milton. 2011. Vulnerability to paroxysmal oscillations in delayed neural networks: A basis for nocturnal frontal lobe epilepsy?. Chaos 21: 047512. Abstract Article
 
32. Chan, LM, JL Brown, and AD Yoder. 2011. Integrating statistical genetic and geospatial methods brings new power to phylogeography. Molecular Phylogenetics and Evolution 59: 523-537.
 
33. Chan, LM, SM Goodman, **MD Nowak, DW Weisrock, and AD Yoder. 2011. Increased population sampling confirms low genetic divergence among Pteropus (Chiroptera: Pteropodidae) fruit bats of Madagascar and other western Indian Ocean islands. PLoS Currents: Tree of Life 3: RRN1226. Article
 
34. Chan, P., Halfar, J., Williams, B., Hetzinger, S., Steneck, R., Zack, T., and Jacob, D. 2011. Freshening of the Alaska Coastal Current recorded by coralline algal Ba/Ca ratios. Journal of Geophysical Research 116: G01032, doi:10.1029/2010JG001548.
 
35. Chauke, M., Malisch, J.L., Robinson, C., de Jong, T.R. and W. Saltzman . 2011. Effects of reproductive status on behavioral and endocrine responses to acute stress in a biparental rodent, the California mouse (Peromyscus californicus). Hormones and Behavior 60: 128-138. Abstract
 
36. Crino, O.L., Van Oorschot, B.K., Johnson, E.E., Malisch, J.L., and C.W. Breuner. 2011. Proximity to a high traffic road: Glucocorticoid and life history consequences for nestling white-crowned sparrows. General and Comparative Endocrinology in press: . Abstract
 
37. Fortune, E.S., C. Rodriguez, D. Li, G.F. Ball and M.J. Coleman. 2011. Neural mechanisms for the coordination of duet singing in wrens. Science 334: 666-70. Abstract
 
38. Garland, T., Jr., S. A. Kelly, J. L. Malisch, E. M. Kolb, R. M. Hannon, B. K. Keeney, S. L. Van Cleave,. 2011. How to run far: Multiple solutions and sex-specific responses to selective breeding for high voluntary activity levels. Proceedings of the Royal Society B 278: 574-581. Abstract Article
 
39. Halfar, J., Hetzinger, S., Adey, W., Zack, T., Gamboa, G., Kunz, B., Williams, B., and Jacob, D. 2011. Coralline red algal growth increment widths archive North Atlantic climate variability. Palaeogeography, Palaeoclimatology, Palaeoecology 320: 71-80.
 
40. Halfar, J., Williams, B., Hetzinger, S., Steneck, B., Lebednik, P.,Winsborough, C., Omar, G., and Chan, P. 2011. 225 years of Bering Sea climate and ecosystem dynamics archived by coralline algae. Geology 39: 579-582.
 
41. J. G. Milton. 2011. Neurodynamics and ion channels. The intersection of neurosciences, biology, mathematics, engineering and physics : 111-124.
 
42. J. Milton, A. Quan and I. Osorio. 2011. Nocturnal frontal lobe epilepsy: Metastability in a dynamic disease?. The intersection of neurosciences, biology, mathematics, engineering and physics : 501-510.
 
43. J. Milton, A. Radunskaya, W. Ou and T. Ohira. 2011. A team approach to undergraduate research in biomathematics: Balance control. Math. Model. Nat. Phenom. 6(6): 260-277. Abstract Article
 
44. J. Milton, J. Lippai, R. Bellow, A. Blomberg, A. Kamimura and T. Ohira. 2011. Visuomotor tracking tasks with delayed pursuit and escape (DETC2011-47312). 8th International Conference on Multibody Systems, Nonlinear Dynamics and Control 4: 419-425. Abstract
 
45. J. Wu, H. Zivari-Piran, J. D. Hunter and John G. Milton. 2011. Projective clustering using neural networks with adaptive delay and signal transmission loss. Neural Computation 23: 1568-1604. Abstract Article
 
46. John G. Milton. 2011. The delayed and noisy nervous system: Implications for neural control. Journal of Neural Engineering 8: 065005. Abstract Article
 
47. Robertson, JM and LM Chan. 2011. Commentary: Species richness in a tropical biodiversity hotspot. Journal of Biogeography 38: 2043-2044.
 
48. Sinclair, D.J., Williams, B., Allard, G., Ghaleb, B., Ross, S.W., and Risk, M.J. 2011. Reproducibility of trace element profiles in a specimen of the deep-water Bamboo Coral Keratoisis sp.. Geochimica et Cosmochimica Acta 75: 5101-5121.
 
49. T. Ohira, A. Kamimura and J. G. Milton. 2011. Pursuit-escape with distance-dependent delay. ENOC2011 7th European Nonlinear Dynamics Conference, July 24-29, Rome, Italy : MS-11. Abstract
 
50. Thines B, Harmon FG. 2011. Four easy pieces: mechanisms underlying circadian regulation of growth and development. Curr Opin Plant Biol 14 (1): 31-7.
 

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