Joint Science Department Selected Publications Database

Current Number of publications listed in Biology: 453

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1. Dishman, Diana L., D.M. Thomson and N.J. Karnovsky. 2009. Does simple feeding enrichment raise activity levels of captive ring-tailed lemurs (Lemur catta). Applied Animal Behavior Science 116: 88-95.

2. Field, R., B.A. Hawkins, H.V. Cornell, D.J. Currie, A. F. Diniz-Filho, J. F. Guégan, D.M. Kaufman, J.T. Kerr, G.G. Mittelbach, T. Oberdorff, E.M. O’Brien, and J.R.G. Turner. 2009. Spatial species-richness gradients across scales: a meta-analysis. Journal of Biogeography 36: 132-147.

3. G. B. Ermentrout and J. G. Milton. 2009. The dynamics of toys. DS Web Magazine January: . Abstract Article

4. I. Osorio, M. G. Frei, D. Sornette, J. Milton. 2009. Pharamco-resistant seizures: self-triggering capacity, scale-free properties and predictability?. Eurpoean Journal of Neuroscience 30: 1554-1558.

5. J. G. Milton. 2009. Introduction to focus issue: Bipedal locomotion - From robots to humans. Chaos 19: 026101. Abstract

6. J. G. Milton, T. Ohira, J. L. Cabrera, R. M. Fraiser, J. B. Gyorffy, F. K. Ruiz, M. A. Strauss, E. C. Balch, P. J. Marin, J. L. Alexander. 2009. Balancing with vibration: A prelude for `drift and act' balance control. PLoS ONE 4: e7427. Abstract Article

7. J. Milton, J. L. Cabrera, T. Ohira, S. Tajima, Y. Tonosaki, C. W. Eurich, S. A. Campbell. 2009. The time-delayed inverted pendulum: Implications for human balance control. Chaos 19: 026110. Abstract

8. J. Milton, J. L. Townsend, M. A. King and T. Ohira. 2009. Balancing with positive feedback: The case for discontinuous control. Philosophical Transactions of the Royal Society, Series A 367: 1181-1193. Abstract

9. McEachern, K.A., D.M. Thomson and K. Chess. 2009. Climate alters response of an endemic island plant to removal of invasive herbivores. Ecological Applications In press: .

10. Mendelson, J.R., III, J.B. Pramuk, R. Gagliardo, A. Pessier, B.B. Rothermel, K.C. Zippel, C. Bevier, M.R. Preest, and B. Crother. 2009. Amphibian Recommendations. Science and Children 46(8): 8.

11. Mendelson, J.R., III, J.B. Pramuk, R. Gagliardo, A. Pessier, B.B. Rothermel, K.C. Zippel, C. Bevier, M.R. Preest, and B. Crother.. 2009. Considerations and recommendations for Raising Live Amphibians in Classrooms. . Herpetological Review 40: 142-144.

12. T. Ohira and J. Milton. 2009. Delayed random walks: Investigating the interplay between noise and delays. Delay Differential Equations: Recent Advances and New Directions : 305-335.

13. Bauer EE, MJ Coleman, TF Roberts, A Roy, J Prather, R Mooney. 2008. A Synaptic Basis for Auditory–Vocal Integration in the Songbird. Journal of Neurosience 28: 1509 – 1522.

14. Burgio G, La Rocca G, Sala A, Arancio W, Di Gesù D, Collesano M, Sperling AS, Armstrong JA, van Heeringen SJ, Logie C, Tamkun JW, Corona DF. 2008. Genetic identification of a network of factors that functionally interact with the nucleosome remodeling ATPase ISWI.. PLoS Genetics 4: e1000089. Abstract Article

15. Coyne, R.S., Thiagarajan, M., Jones, K.M., Wortman, J.R., Tallon, L.J., Haas, B.J., Cassidy-Hanley, D.M., Wiley, E.A., et al. 2008. Refined annotation and assembly of the Tetrahymena thermophila genome sequence through EST analysis, comparative genomic hybridization, and targeted gap closure. BMC Genomics 9: 562-579.

16. Fay, P.A., D.M. Kaufman, J.B. Nippert, J. D. Carlisle, and C.W. Harper. 2008. Changes in ecosystem function due to extreme rainfall events in grassland: implications for responses to climate change. Global Change Biology 14: 1600-1608.

17. J. D. Hunter, J. Wu and J. G. Milton. 2008. Clustering neural spike trains with transient responses. Proceedings IEEE Decision and Control 47: 2000-2005. Abstract

18. J. G. Milton, J. L. Cabrera and T. Ohira. 2008. Unstable dynamical systems: Delays, noise and control. EPL 83: 48001. Abstract

19. J. G. Milton, S. L. Small and A. Solodkin. 2008. Why did Casey strike out? The neuroscience of hitting. Brain on Cubs: Inside the heads of players and fans : 43-57.

20. John Milton, Steven L. Small and Ana Solodkin. 2008. Imaging motor imagery: Methodological issues related to expertise. Methods 45: 336-341. Abstract

21. Lundberg, J. and McFarlane, D. A.. 2008. Kents Cavern. A field guide to the natural history.. : 44p..

22. McDaniel IE, Lee JM, Berger MS, Hanagami CK, Armstrong JA. 2008. Investigations of CHD1 function in transcription and development of Drosophila melanogaster. Genetics 1: 583-587. Abstract Article

23. Preest, M.R. and A. Cree. 2008. Corticosterone treatment has subtle effects on thermoregulatory behavior and raises metabolic rate in the New Zealand common gecko, Hoplodactylus maculatus. Physiological and Biochemical Zoology 81(5): 641-650.

24. Preest, M.R. and A. Cree. 2008. Corticosterone treatment has subtle effects on thermoregulatory behavior and raises metabolic rate in the New Zealand common gecko, Hoplodactylus maculatus. . Physiological and Biochemical Zoology 81 (5): 641-650.

25. Sadava, D., Heller, C., Orians, G., Purves, W. and Hillis, D.. 2008. . : . Article

26. Sean R. Gallagher and Emily A. Wiley. 2008. Current Protocols: Essential Laboratory Techniques. : .

27. Smith, J., Torigoe, S., Maxson, J., Fish, L., and Wiley, E.A. 2008. A class II HDAC deacetylates newly-synthesized histones in Tetrahymena. Eukaryotic Cell 7(3): 471-482.

28. Wurster C. M., Patterson W.P., McFarlane D.A., Wassenaar L. I., Hobson K.A., Athfield N. B., and Bird M. I.. 2008. Stable carbon and hydrogen isotopes from bat guano in the Grand Canyon, USA, reveal Younger Dryas and 8.2 ka events.. Geology 36:683-686. 36: 683-686.

29. Armstrong JA. 2007. Negotiating the nucleosome: factors that allow RNA polymerase II to elongate through chromatin. Biochemistry and Cell Biology 85: 426-434. Abstract Article

30. Armstrong, JA and Schulz, JS. 2007. Agarose Gel Electrophoresis. Current Protocols in Essential Laboratory Techniques : .

31. Christenson K. and McFarlane D. A.. 2007. An ecologically significant range extension for Hahn’s Short-tailed fruit bat, (Carollia subrufa) from southwestern Costa . Chiroptera Neotropical 13(2): 319-321.

32. Coleman MJ, A Roy, JM Wild and R Mooney. 2007. Thalamic gating of auditory responses in telencephalic song control nuclei. Journal of Neurosience 27: 10024-10036.

33. Corona DF, Siriaco G, Armstrong JA, Snarskaya N, McClymont SA, Scott MP, Tamkun JW. 2007. ISWI regulates higher-order chromatin structure and histone H1 assembly in vivo. PLoS Biology 5: e232. Abstract Article

34. D. Sadava and W, Hamman. 2007. RNA interference against MDR1 but not MRP1 reverses drug resistance in human small-cell lung cancer cells. Journal of Cancer Molecules 3: 91-94.

35. D. Sadava, E. Whitlock, S. E. Kane. 2007. The green tea polyphenol, epigallocatechin-3-gallate inhibits telomerase and induces apoptosis in drug-resistant lung cancer cells. Biochemical and Biophysical Research Communications 360: 233-237.

36. Huang, C-J, Tang, Z, Lin, R.-J, and Tucker, P.W. . 2007. Phosphorylation by SR kinases regulates the binding of PTB-associated splicing factor (PSF) to the pre-mRNA polypyrimidine tract. . FEBS lett 581(2): 223-232. Abstract

37. J. G. Milton, S. A. Chkhenkeli and V. L. Towle. 2007. Brain connectivity and the spread of epileptic seizures. Handbook of Brain Connectivity : 477-503.

38. John Milton, Ana Solodkin, Petr Hlustik and Steven L. Small. 2007. The mind of expert motor performance is cool and focused. NeuroImage 35: 804-813. Abstract

39. Lundberg, J. and McFarlane, D.A.. 2007. Pleistocene depositional history in a periglacial terrane: A 500ka record from Kents Cavern, Devon, United Kingdom.. Geosphere 3: 199-219. Abstract

40. Lundberg, J. and McFarlane, D.A.. 2007. Speleogenesis of the Mt. Elgon ‘Elephant’ Caves, Kenya.. Geological Society of America Special Paper 404 : 51-63. Abstract

41. Parker, K., Maxson, J., Mooney, A., and Wiley, E.A. 2007. Class I histone deacetylase Thd1p promotes global chromatin condensation in Tetrahymena thermophila. Eukaryotic Cell 6: 1913-1924.

42. Tang, Z., Alaei, Tsurumi, A., C., Wilson, C., S., Chiu, C., Oya, J., and Ngo, B. . 2007. Dsk1 Kinase Phosphorylates SR Proteins and Regulates Their Cellular Localization in Fission Yeast. . Biochemical Journal 405 (1): 21-30. Abstract Article

43. Thomson, D. M. 2007. Do source-sink dynamics promote the spread of an invasive grass into a novel habitat. Ecology 88: 3126-3134.

44. Wurster, C. M., McFarlane, D. A., and Bird, M. I.. 2007. Spatial and temporal expression of vegetation and atmospheric variability from stable carbon and nitrogen isotope analysis of bat guano in the southern United States.. Geochimica et Cosmochimica Acta 71: 3302-3310. Abstract

45. D Sadava. 2006. "The story of PC-SPES and prostate cancer". Textbook of Complementary and Alternative Medicine : .

46. Juan Luis Cabrera, Christian Luciani and John Milton. 2006. Neural control on multiple time scales: Insights from human stick balancing. Condensed Matter Physics 9: 373-383. Abstract

47. Kum-Loong Boon, Tatsiana Auchynnikava, Gretchen Edwalds-Gilbert, J. David Barrass, Alastair P. Droop, Christophe Dez, and Jean D. Beggs. 2006. Yeast Ntr1/Spp382 Mediates Prp43 Function in Postspliceosomes . Molecular and Cellular Biology 26: 6016-6023.

48. Lundberg, J. and McFarlane, D.A.. 2006. A minimum age for canyon incision and for the extinct Molossid bat, Tadarida constantinei, from Carlsbad Caverns National Park, New Mexico.. Journal of Cave and Karst Studies 68(3): 155-177.

49. Tadaaki Hosaka, Toru Ohira, Christian Luciani, Juan Luis Cabrera, and John G Milton. 2006. Balancing with noise and delay. Progress of Theoretical Physics Supplement 161: 314-319. Abstract

50. Thomson, D.M.. 2006. Detecting the effects of introduced species: a case study of competition between Apis and Bombus. Oikos 114: 407-418.